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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015945189.1_cds_XP_016487770.1_78470
CDS Infomation

[gene=LOC107807845] [db_xref=GeneID:107807845] [protein=shikimate O-hydroxycinnamoyltransferase-like] [protein_id=XP_016487770.1] [location=complement(join(14725..15612,19178..19588))] [gbkey=CDS]
Sequence

ATGAAAATCGAGGTGAAAGAATCAACAATGGTGAAACCAGCAACAGACACACCACAGACA
AACCTGTGGAACTCAAACGTGGATTTAGTTGTTCCAAATTTCCACACCCCAAGTGTTTAC
TTTTACAGGCCATTGTCAAGTGCTTCAAATTTCTTTGATTCAAATATGCTTAAGGAGGCA
TTGAGTAAAGCGTTAGTGCCGTTTTATCCAATGGCTGGTAGGTTAAAAAGGGATGAAGAT
GGACGTATTGAAATTGAATGCATAGGACAAGGGGTTTTGTTTGTTGAAGCAGAATCTGAT
GGAATAGTTGATGATTTTGGTGATTTTGCGCCTACTTTGGAACTCCGGCGTCTTATTCCT
GCCGTTGATTATTCTCAGGGAATCCATTCTTATGCTCTCCTAGTTTTGCAGATCACTCAT
TTCAAATGTGGAGGAGTTTCTCTCGGTGTAGGAATGCAACATCATGCTGCTGATGGTTTT
TCTGGTCTTCACTTCATCAACACATGGTCGGACATGGCTCGTGGTTTGGACCTCACAATT
CCACCTTTCATAAACCGAACACTTCTCCGTGCTCGTGATCCACCCTTGCCTCAGTTCCCA
CACATTGAATACCAGCCACCTCCAACTCTCAAGAACATTGCCAAAACTGAAGCAGTTCCT
GAGACTGCTGTTTCCATCTTCAAGTTAACCCGTGATCAAATCAATGCCTTGAAAGCCAAG
TCTAAGGAAGATGGAAATACCGTAAACTACAGCTCCTATGAAATGTTAGCAGGACATGTA
TGGCGCTCTACTTGTATGGCACGAGGACTTGAAGAAGATCAAGGAAGCAAGTTGTATATA
GCAACCGATGGACGTTCTAGGCTCAGGCCTATTCTTCCACCAGGCTACTTTGGTAATGTG
ATATTTACTGCTACTCCAATTGCAGTGGCTGGTGATCTAAAATCCAAGCCCATTTGGTAT
GCTGCAAGTAAAATTCATGATGCATTGGCTCAGATGGACAACGACTACTTAAGATCAGCT
CTCGATTACTTGGAATTACAGCCCGACCTAAAGGCTCTTGTTCGCGGAGCACATACTTTT
AGATGCCCAAATCTTGGGATCACTAGTTGGGTTAGGCTGCCTATACACGACGCAGATTTT
GGCTGGGGTAGACCTATATTTATGGGACCTGGTGGTATCGCTTATGAAGGGTTAAGCTTT
ATATTGCCAAGTCCTACCAATGATGGGAGTCTATCGGTTGCTATCTCGCTTCAAGCAGAC
CATATGAAACTTTTCGAGAAATATTTGTATGACATTTGA

Peptide Sequence

PEP ID

XP_016487770.1
PEP Infomation

PREDICTED: shikimate O-hydroxycinnamoyltransferase-like [Nicotiana tabacum]
Sequence

MKIEVKESTMVKPATDTPQTNLWNSNVDLVVPNFHTPSVYFYRPLSSASNFFDSNMLKEA
LSKALVPFYPMAGRLKRDEDGRIEIECIGQGVLFVEAESDGIVDDFGDFAPTLELRRLIP
AVDYSQGIHSYALLVLQITHFKCGGVSLGVGMQHHAADGFSGLHFINTWSDMARGLDLTI
PPFINRTLLRARDPPLPQFPHIEYQPPPTLKNIAKTEAVPETAVSIFKLTRDQINALKAK
SKEDGNTVNYSSYEMLAGHVWRSTCMARGLEEDQGSKLYIATDGRSRLRPILPPGYFGNV
IFTATPIAVAGDLKSKPIWYAASKIHDALAQMDNDYLRSALDYLELQPDLKALVRGAHTF
RCPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFILPSPTNDGSLSVAISLQAD
HMKLFEKYLYDI

Transcript Sequence

Gene sequence data has not been registered.